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Config Generator

Brown Lab Single Cell RNA Sequencing

Directory Info Alignment Output Directory:

Merge Samples Merge Samples:

Samples

Filter Options Filter Out Mitochondrial:

Regress Mitochondrial Variation:

Percent Mitochondrial:

nCount RNA Upper:

nCount RNA Lower:

nFeature RNA Upper:

nFeature RNA Lower:

Dimensional Reduction Settings Run UMAP:

Run tSNE:

PCA Component Count:

Init Seurat Settings Min Cells:

Min Features:

Featureplot Settings